Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1230382 chr5:96254354 T/A ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs12304718 chr12:7632376 A/G ENO2 chr12:7022909-7032861:+ 1.08 5.78 4.32E-7 Box Plot
ACC rs12362775 chr11:44117444 A/G ACCS chr11:44087475-44105772:+ 0.48 5.27 2.66E-6 Box Plot
ACC rs12369556 chr12:75773464 A/G GLIPR1L2 chr12:75784850-75826468:+ 0.69 5.19 3.59E-6 Box Plot
ACC rs12404754 chr1:213064096 C/G LQK1 chr1:213029947-213031480:- 0.71 5.91 2.67E-7 Box Plot
ACC rs12405293 chr1:213068096 T/C LQK1 chr1:213029947-213031480:- 0.73 6.32 6.05E-8 Box Plot
ACC rs12419607 chr11:74459355 C/A XRRA1 chr11:74518784-74660245:- 0.69 5.23 3.04E-6 Box Plot
ACC rs12421899 chr11:74458046 G/A XRRA1 chr11:74518784-74660245:- 0.69 5.23 3.04E-6 Box Plot
ACC rs12463867 chr2:132278640 C/G LOC150776 chr2:132250386-132279149:+ 0.54 7.35 1.37E-9 Box Plot
ACC rs12536662 chr7:98205391 G/T TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs12567975 chr1:213070425 C/T LQK1 chr1:213029947-213031480:- 0.75 6.19 9.52E-8 Box Plot
ACC rs12567976 chr1:213070458 C/T LQK1 chr1:213029947-213031480:- 0.75 6.19 9.52E-8 Box Plot
ACC rs12573958 chr11:60134042 G/A MS4A14 chr11:60146003-60185229:+ 0.34 5.46 1.34E-6 Box Plot
ACC rs12574850 chr11:74513449 G/T XRRA1 chr11:74518784-74660245:- 0.74 5.56 9.58E-7 Box Plot
ACC rs12577614 chr11:74671100 T/A XRRA1 chr11:74518784-74660245:- 0.77 6.75 1.22E-8 Box Plot